WSSV envelope protein VP51B links structural protein complexes and may mediate virus infection

White spot syndrome virus (WSSV), an enveloped double‐stranded DNA virus, is the causative agent of a disease that has led to severe mortalities of cultured shrimps in Taiwan and many other countries. In the previous study, Penaeus monodon chitin‐binding protein (CBP) and glucose transporter 1 (Glut1), two cell membrane proteins, were found to at least interact with other 10 WSSV envelope proteins including VP51B. These envelope proteins might form a protein complex. According to the known information, VP51B was used to identify its role in the protein complex. Western blotting of the intact viral particles and fractionation of the viral components confirmed that VP51B is one of WSSV envelope proteins. In this study, the protein–protein interaction between VP51B and other WSSV envelope proteins was identified by far‐western blot experiment and VP51B was found to interact with VP24, VP31, VP32, VP39B and VP41A. Furthermore, the in vivo neutralization experiment using recombinant VP51B plus with VP39B showed the best inhibition. These data indicate that VP51B participates in the WSSV protein complex and plays an important role in WSSV infection.     

Effect of dietary phosphorus levels on growth and body composition of crucian carp,Carassius auratus under indoor and outdoor experiments

Indoor and outdoor experiments were carried out simultaneously to evaluate the effects of dietary phosphorus levels on growth performance and body composition of crucian carp. Monocalcium was used to formulate extruded feed containing available phosphorus (AP) of 1.5 (D1), 4.7 (D2), 6.3 (D3) and 9.0 (D4) g kg^?1. Twelve 500‐L recirculating tanks were assigned to four triplicate groups with each tank stocked with 15 juveniles (39.88 ± 0.14 g) for indoor experiment. Twelve polyethylene enclosures were assigned to four groups with each one stocked with 120 juveniles (44.08 ± 1.36 g). After 8 weeks of feeding, survival ranged from 96% to 100%. Weight gain, special growth rate, protein efficiency ratio and feed conversion rate did not show significant differences among dietary treatments in both experiments. Fish cultured in the enclosures grew better, although D1 and D2 treatments did not reach significant level. Crude protein and phosphorus content of the fish were not significantly affected by dietary phosphorus level. Moisture, crude lipid, crude ash and vertebrae phosphorus were significantly affected by different phosphorus levels. Based on vertebrae phosphorus, crucian carp cultured in the tanks and in the enclosures showed phosphorus deficiency under 4.7 g kg^?1 and 6.3 g kg^?1 AP, respectively.     

Seasonal movements of immature Kemp's ridley sea turtles (Lepidochelys kempii) in the northern gulf of Mexico

1. Seasonal movements and core habitat areas of immature Kemp's ridley sea turtles (Lepidochelys kempii) in the northern Gulf of Mexico were tracked via satellite telemetry. Tagged turtles were incidentally captured by recreational fishermen and rehabilitated at the Institute for Marine Mammal Studies in Gulfport, Mississippi.
2. The average size of the core habitat areas (50% KDE (kernel density estimation)) was 1660.2 km² ± 3438.2 SD. Turtles displayed strong intra‐ and inter‐annual site fidelity to the Mississippi Sound during the spring, summer, and autumn months. During the winter months, most turtles, probably influenced by water temperatures, migrated to nearshore waters of Louisiana on either side of the Mississippi River Delta. However, other migration strategies were also observed.
3. Overall, these data indicate that the Mississippi Sound is an important developmental habitat for this critically endangered species. In addition, their wintering grounds in Louisiana are utilized by adult Kemp's ridleys and other sea turtle species as foraging grounds and migratory corridors. The high use of these areas by sea turtle populations increases the potential for negative impacts from anthropogenic disturbances (e.g. shrimp trawling, oil production, hypoxia) that occur there.

Copyright © 2016 John Wiley & Sons, Ltd.     

Forecasting the Genetic Impacts of Net Pen Failures on Gulf of Mexico Cobia Populations Using Individual‐based Model Simulations

Offshore net pen fish farming provides a cost‐efficient means for production of marine finfish, and there is great interest in development of net pen operations in domestic waters. However, there are concerns over the possible genetic and ecological impacts that escaped fish may have on wild populations. We used individual‐based simulations, with parameter values informed by life history and genetic data, to investigate the short‐term (50 yr) impacts of net pen failures on the genetic composition of cobia, Rachycentron canadum, stocks in the Gulf of Mexico. Higher net pen failure rates resulted in greater genetic impacts on the wild population. Additionally, the use of more genetically differentiated source populations led to larger influxes of non‐native alleles and greater temporal genetic change in the population as a result of net pen failure. Our results highlight the importance of considering the appropriate source population for broodstock collection in net pen aquaculture systems and help to provide a general set of best management practices for broodstock selection and maintenance in net pen aquaculture operations. A thorough understanding of the genetic diversity, stock structure, and population demography of target species is important to determine the impact escapees can have on wild populations.     

Potential application of baited remote underwater video to survey abundance of west coast rock lobster Jasus lalandii

The first assessment of the baited remote underwater video system (BRUVs) for monitoring rock lobster Jasus lalandii (Milne‐Edwards) in South Africa was compared to annual ring net and trap survey data. Count data from 58 BRUVs, 36 ring net and 95 trap samples were fitted with generalised additive models using depth, habitat, time and spatial gradient as independent variables. A power analysis was used to determine the number of samples needed per annum to detect a 5 and 10% increase and decrease in population size. The BRUVs outperformed the nets and traps in terms of sampling effort and were better at detecting changes in abundance of lobster than abundance of three fish species. Considering factors such as cost, analysis time, additional data and environmental impact, traps are the most feasible method in deeper waters but BRUVs could replace nets and traps in depths less than 60 m, low‐density areas and marine reserves.     

Soil protection for a sustainable future: options for a soil monitoring network for Ireland

The increased recognition of the importance of soil is reflected in the UN Post‐2015 Development Agenda with sustainable development goals that directly and indirectly relate to soil quality and protection. Despite a lack of legally binding legislation for soil protection, the European Commission remains committed to the objective of soil protection. However, the achievement of a legally binding framework for soil protection relies on the implementation of a soil monitoring network (SMN) that can detect changes to soil quality over time. As beneficiaries do not pay for the provision of soil information, the options for soil monitoring are limited. The use of existing data sets should be considered first. Using Ireland as an example, this research explored the opportunities for a SMN for Ireland considering three existing national data sets. The options for a SMN are considered in terms of their spatial and stratified distribution, the parameters to be measured and an economic analysis of the options proposed. This research finds that for Ireland, either a 10 or a 16 km² grid interval stratified by land use and drainage class offers the best potential in relation to the spatial distribution of existing data sets to reflect local data at a national level. With existing data, the stratified SIS data using the 16 km² grid offers the best value for money, with baseline costs for analysis, excluding field costs, of between €706 481 and €2.8 million. Acknowledging the impossibility of measuring all parameters with ideal frequency, this study proposes a two‐tier system for optimized monitoring frequency. Parameters must anticipate future policy requirements. Finally, the implementation of a SMN must be accompanied by standardized methods, defined thresholds and action mandates to maintain soil quality within allowable limits.     

Growth performance and whole‐body composition of yellow catfish (Pelteobagrus fulvidraco Richardson) under feeding restriction

Fish growth is an important index in aquaculture practice. However, the effect of growth under restricted feeding on quality of fish grown to the same size remains poorly unknown. In this study, yellow catfish were reared by feeding them at three different feeding rates such as low (FR‐L group), medium (FR‐M group) and high (apparent satiation) ration levels for 82, 58 and 34 days to reach the same size, respectively. After this period, the growth performance, whole‐body amino acid composition and fatty acid profile of the fish were evaluated. Feeding restriction led to significant decreases in specific growth rate and feed conversion efficiency. Significant increases in dry matter, protein and energy contents were observed in fish under both restricted feeding treatments. FR‐L‐treated fish had significantly lower whole‐body essential amino acid contents, and significantly higher Ala and non‐essential amino acid contents compared to fish fed to satiation. Fish in restricted feeding treatments had significantly higher n‐3 PUFA and n‐3/n‐6 ratio compared to the fish fed to satiation. The present results indicate that from a quality perspective, there are certain advantages in improvement of whole‐body composition and enrichment of n‐3 PUFA associated with the restricted feeding of yellow catfish at slow growth rate.     

Elasmobranch fisheries in the Arabian Seas Region: Characteristics,trade and management

The Arabian Seas Region plays an important role in the global landings and trade of sharks and rays. The United Arab Emirates (UAE) and Yemen, two countries with stark socio‐economic differences, serve as major regional trade hubs for shark and ray products and four countries (Oman, Pakistan, UAE and Yemen) supply nearly 11% of dried fin exports to Hong Kong. Yet, little information is available on the characteristics of this trade and the fisheries contributing to it. Here, we review the fisheries characteristics, trade, utilization and distribution chain of sharks and rays in 15 countries of the Arabian Seas Region based on published and grey literature, landing surveys, field observations and interviews with fishermen and traders. Although regional shark fisheries remain mostly artisanal, reported shark and ray landings represent 28% of the regional total fish production, reaching 56,074 mt in 2012 (7.3% of total world catches), with Iran, Oman, Pakistan and Yemen ranking as the primary catchers. Utilization and distribution patterns are complex, vary between landing sites and countries, and remain unmonitored. Based on widespread over‐exploitation of most teleost fisheries, current exploitation levels for most sharks and rays are potentially unsustainable. The situation is exacerbated by limited research and political will to support policy development, the incomplete nature of fisheries data, as well as insufficient regulations and enforcement. A better understanding of shark and ray fisheries will be key for regulating trade, promoting conservation and developing management initiatives to secure food security, livelihoods and biodiversity conservation in the region.